Review Article |
Corresponding author: Prasojo Pribadi ( prasojopribadi@ummgl.ac.id ) Academic editor: Rumiana Simeonova
© 2023 Setiyo Budi Santoso, Prasojo Pribadi, Lalu Muhammad Irham.
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Santoso SB, Pribadi P, Irham LM (2023) Isoniazid-induced liver injury risk level in different variants of N-acetyltransferase 2 (NAT2) polymorphisms: A literature review. Pharmacia 70(4): 973-981. https://doi.org/10.3897/pharmacia.70.e109869
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Individual NAT2 genotype identity data should be enriched to prevent Isoniazid-induced liver injury (IDILI) and optimize the dose of Isoniazid (INH). Therefore, this study aims to present the level of IDILI risk for specific genotype alleles. The data collection involves literature indexed by Google Scholar, Scopus, and Pubmed databases. The search uses a combination of the following keyword variants “INH” OR “INH”, “liver injury” OR “hepatotoxicity”, “polymorphism” OR “pharmacogenomic”, and “N-acetyltransferase 2” OR “NAT2”. Furthermore, the screening results of library sources were narrowed to 11 original articles that met the inclusion criteria. The IDILI risk assessment analysis due to NAT2 enzyme polymorphism following the odds ratio has a 95% confidence interval. The results showed that the IDILI risk level of the slow acetylator group was 3.11 times higher than other populations. Meanwhile, the rapid and intermediate acetylator groups were not at risk. Three variants related to *6 allele were classified as high risk; *6A/*6A risk 5.76 times, *6A/*7B (5.54 times), and *6/*7 (4 times). The three allele configurations of the *5 and *7 were also classified as a risk; *5B/*7B (5 times), *7B/*7B (3.23 times), and *5/*7 (2,74 times).
Hepatotoxicity, Isoniazid dose adjustment, pharmacogenomic, polymorphism
Isoniazid (INH) has been used as an anti-tuberculosis (TB) drug since 1952, and reports of INH-induced liver injury (IDILI) are ongoing and common (
INH metabolic activity related to IDILI are associated with polymorphisms of several genes including N-acetyltransferase II (NAT2), Cytochrome P450 2E1 (CYP2E1), and glutathione S transferases (GST1) (
Further studies on the genetic polymorphism of NAT2 are expected to include different ethnic populations (
Some closely related slow acetylator NAT2 alleles are identified as IDILI trigger genotypes and are related with *5, -*6, and -*7 (
The study priority for the causative factors of IDILI is based on the NAT2 polymorphism, and the group with slow-acetylator was also susceptible to the exposure. Individual NAT2 genotype identity data should be improved by clinicians to optimize INH dose. This study attempts to present the IDILI risk level for specific genotype alleles since there are limited publications that identify the related topic. Therefore, these results should be the basis for adjusting the INH dose in genotype variants susceptible to IDILI.
The study involves literature indexed by Google Scholar, Scopus, and Pubmed databases, and the search uses a combination of the following keyword variants; “isoniazid” OR “INH”, “liver injury” OR “hepatotoxicity”, “polymorphism” OR “pharmacogenomic”, AND “N-acetyltransferase 2” OR “NAT2”. This study only used original articles in English language which were peer-reviewed journals published between 2011 and 2020 (Fig.
This study only involves results that meet all of the following criteria; (a) Study on subjects with tuberculosis without other comorbidities, (b) Study on subjects receiving INH as part of a standard regimen of 5 mg/Kg/day (maximum dose 300 mg/day), (c) Case study-control on subjects exposed to IDILI, (d) Study outcome involving the distribution of single nucleotide polymorphism allele identity and acetylator phenotype.
Each literature was extracted by identifying the name of the publication journal, the author’s name, year, title, antituberculosis drugs combination, population settings, number of respondents, and study outcomes in the total number of cases and controls. It also includes the identity frequency of the single nucleotide allele polymorphism and acetylator phenotype.
The main analysis aims to measure the level of IDILI risk in each genotype. Meanwhile, the risk assessment due to NAT2 polymorphism was based on the odds ratio of 95% confidence interval. The distribution of IDILI cases is compared against the controls, with individual case and control comparisons across all other genotypes combined for each allele. Furthermore, the analysis uses Stata MP software edition 14.
The literature search strategy obtained 423 articles, and a total of 11 articles met the inclusion criteria (Fig.
No | Study | Setting | Objectives | Results |
---|---|---|---|---|
1. | ( |
Indonesia | Investigating NAT2 variants and acetylator status in the severity of IDILI. | NAT2 slow acetylators had a significant association with IDILI risk. Ultra-slow acetylators had an even stronger association, while fast and intermediate acetylators were associated with decreased IDILI risk. |
2. | ( |
Indonesia | Investigating NAT2 polymorphisms in IDILI | NAT2*5, *6, and *7 polymorphisms were associated with specific genotypes, providing insights into genetic susceptibility. |
3. | ( |
Tunisia | Assessing the relationship between isoniazid serum concentration and the incidence of IDILI. | High serum concentration of isoniazid was a risk factor for IDILI. Combined NAT2/CYP2E1 gene polymorphisms increased the risk of IDILI |
4. | ( |
Japan | Developing a predictive system for IDILI risk associated with anti-tuberculosis agents. | NAT2 slow acetylators were significantly associated with IDILI risk. A logistic regression model using age and NAT2 genotype showed good predictive ability. |
5. | ( |
Brazil | Investigating the role of NAT2 and CYP2E1 in hepatotoxicity.. | Slow NAT2 acetylators, particularly allele *5, had a strong association with hepatotoxicity risk. |
6. | ( |
Spain | Analyzing NAT2 polymorphisms for their association with IDILI. | Slow NAT2 genotypes were more prevalent in cases, suggesting an increased risk of hepatotoxicity. |
7. | ( |
China | Investigating NAT2 and CYP2E1 genetic polymorphisms in IDILI. | NAT2 slow acetylator genotypes, especially NAT26A/7B and NAT26A/6A, were hepatotoxicity risk factors. Combined NAT2/CYP2E1 genotypes increased risk. |
8. | ( |
Tunisia | Evaluating NAT2 gene polymorphisms in IDILI. | Slow acetylators had a higher risk of hepatotoxicity. Specific NAT2 variant diplotypes were associated with increased risk. |
9. | ( |
India | Assessing NAT2 and CYP2E1 gene polymorphisms in IDILI. | Slow acetylators and specific NAT2 genotypes were associated with a higher risk of hepatotoxicity. NAT2*4 haplotype provided protection. |
10. | ( |
India | Elucidating NAT2, CYP2E1, and GST gene polymorphisms in IDILI. | Specific NAT2 genotypes were significantly higher in hepatotoxicity patients. C1/C1 allele of CYP2E1 gene was lower in hepatotoxicity patients. GSTM1 was significantly higher in hepatotoxicity patients. |
11. | ( |
Thailand | Investigating NAT2 genotype status in TB patients with IDILI | Slow NAT2 acetylators had a significant association with IDILI risk. |
Research conducted in Indonesia found a significant association between NAT2 slow and ultra-slow acetylators, which increased the risk of IDILI, while fast and intermediate acetylators decreased the risk (
Japan developed a predictive IDILI risk system, showing a significant association between NAT2 slow acetylators and increased risk. A logistic regression model with age and NAT2 genotype predicted effectively (
China identified NAT2 slow acetylator genotypes, like NAT26A/7B and NAT26A/6A, as hepatotoxicity risk factors, with combined NAT2/CYP2E1 genotypes amplifying this risk (
Spain observed a higher prevalence of slow NAT2 genotypes among hepatotoxicity cases (
The study population came from 8 countries representing 6 regions of East Asia; Japan (17%) and China (10%), South Asia; India (24%), Southeast Asia; Indonesia (18%), and Thailand (6%), South America; Brazil (13%), Africa; Tunisia (6%), and Europe; Spain (5%). The 563 (26%) cases and 1577 (74%) controls were recapitulated, and based on the phenotype of the NAT2 enzyme, the subjects included rapid, intermediate, and slow acetylators of 538 (25%), 917 (43%), and 685 (32%) respectively (Tables
Num | SNP | N (Case/Control) | OR | CI 95% | Z Statistic | Sig | References |
---|---|---|---|---|---|---|---|
1 | *4/*4 | 97/377 | 0.6626 | 0.5173–0.8486 | 3.2600 | 0.0011** | ( |
2 | *4/*11 | 0/1 | 0.9326 | 0.0379–22.9265 | 0.0430 | 0.9659 | ( |
3 | *4/*12 | 1/13 | 0.2141 | 0.0279–1.6402 | 1.4840 | 0.1379 | ( |
4 | *4/*12A | 0/5 | 0.2528 | 0.0140–4.5802 | 0.9300 | 0.3522 | ( |
5 | *4/*13 | 0/2 | 0.5592 | 0.0268–11.6658 | 0.3750 | 0.7076 | ( |
6 | *4/*13A | 4/4 | 2.8140 | 0.7014–11.2895 | 1.4600 | 0.1444 | ( |
7 | *11/*11 | 2/23 | 0.2409 | 0.0566–1.0250 | 1.9270 | 0.0540 | ( |
8 | *11/*12 | 0/1 | 0.9326 | 0.0379–22.9265 | 0.0430 | 0.9659 | ( |
9 | *12/*12 | 0/2 | 0.5592 | 0.0268–11.6658 | 0.3750 | 0.7076 | ( |
10 | *12/*13 | 0/3 | 0.3992 | 0.0206–7.7401 | 0.6070 | 0.5438 | ( |
11 | *12A/*13A | 0/1 | 0.9326 | 0.0379–22.9265 | 0.0430 | 0.9659 | ( |
12 | *13/*13 | 1/1 | 2.8043 | 0.1751–44.9106 | 0.7290 | 0.4662 | ( |
Overall | 105/433 | 0.6057 | 0.4769–0.7694 | 4.1090 | 0.0001** |
Generally, the rapid acetylator NAT2 group has OR (CI) value of 0.61 (0.48–0.77) with a significance of <0.0001, and the identification obtained one type of genotype with significant analysis results. Meanwhile, allele *4/*4 has OR (CI) value; 0.66 (0.52–0.85), and this result showed almost no risk of IDILI due to INH (Table
The intermediate NAT2 acetylator group has OR (CI) value of 0.48 (0.39–0.59) with a significance of <0.0001, and the identification obtained 2 types of genotypes with significant analysis. Each of the identification has OR (CI) values; *4/*5; 0.31 (0.21–0.47), *4/*7B; 0.64 (0.42–0.98), and these results indicate the absence of IDILI due to INH (Table
IDILI risk level in the NAT2 phenotype of the intermediate acetylator group.
Num | SNP | N (Case/Control) | OR | CI 95% | Z Statistic | Sig | References |
---|---|---|---|---|---|---|---|
1 | *4/*5 | 27/218 | 0.3140 | 0.2079–0.4742 | 5.508 | <0.0001** | ( |
2 | *4/*5A | 1/0 | 8.4133 | 0.3422–206.8371 | 1.304 | 0.1924 | ( |
3 | *4/*5B | 9/39 | 0.6407 | 0.3083–1.3311 | 1.193 | 0.2327 | ( |
4 | *4/*6 | 20/64 | 0.8707 | 0.5220–1.4523 | 0.530 | 0.5959 | ( |
5 | *4/*6A | 69/191 | 1.0136 | 0.7555–1.3598 | 0.090 | 0.9284 | ( |
6 | *4/*6J | 1/1 | 2.8043 | 0.1751–44.9106 | 0.729 | 0.4662 | ( |
7 | *4/*7 | 12/37 | 0.9065 | 0.4693–1.7509 | 0.292 | 0.7700 | ( |
8 | *4/*7A | 0/1 | 0.9326 | 0.0379–22.9265 | 0.043 | 0.9659 | ( |
9 | *4/*7B | 28/119 | 0.6412 | 0.4199–0.9793 | 2.057 | 0.0397* | ( |
10 | *4/*10 | 0/2 | 0.5592 | 0.0268–11.6658 | 0.375 | 0.7076 | ( |
11 | *4/*19 | 0/1 | 0.9326 | 0.0379–22.9265 | 0.043 | 0.9659 | ( |
12 | *5/*11 | 2/26 | 0.2127 | 0.0503–0.8989 | 2.105 | 0.0353 | ( |
13 | *5/*12 | 0/22 | 0.0613 | 0.0037–1.0129 | 1.951 | 0.0511 | ( |
14 | *5/*13 | 0/3 | 0.3992 | 0.0206–7.7401 | 0.607 | 0.5438 | ( |
15 | *5B/*12A | 0/2 | 0.5592 | 0.0268–11.6658 | 0.375 | 0.7076 | ( |
16 | *6/*12 | 0/4 | 0.3103 | 0.0167–5.7722 | 0.785 | 0.4327 | ( |
17 | *6A/*12A | 0/8 | 0.1638 | 0.0094–2.8433 | 1.242 | 0.2141 | ( |
18 | *6A/*13 | 0/2 | 0.5592 | 0.0268–11.6658 | 0.375 | 0.7076 | ( |
19 | *6A/*13A | 0/2 | 0.5592 | 0.0268–11.6658 | 0.375 | 0.7076 | ( |
20 | *7B/*12A | 0/4 | 0.3103 | 0.0167–5.7722 | 0.785 | 0.4327 | ( |
21 | *13A/*7A | 1/1 | 2.8043 | 0.1751–44.9106 | 0.729 | 0.4662 | ( |
Overall | 170/747 | 0.4806 | 0.3914–0.5902 | 6.995 | <0,0001** |
The slow NAT2 acetylator group has OR (CI) group of 3.11 (2.55–3.80) with a significance of <0.0001, and the identification obtained 6 types of genotypes with significant analysis results. Each of the group has OR (CI) values with the smallest to the largest including; *5/*7: 2.74 (1.49–5.02), *7B/*7B: 3.23 (1.17–8.96), *6/*7: 4.00 (1.76–9.05), *5B/*7B: 5.00 (2.09–11.99) , *6A/*7B: 5.54 (3.56–8.64), *6A/*6A: 5.76 (3.71–8.95). Meanwhile, the IDILI risk due to INH ranged from 2.76 to 5.76 times that of other populations in selected genotypes (Table
Num | SNP | N (Case/Control) | OR | CI 95% | Z Statistic | Sig | References |
---|---|---|---|---|---|---|---|
1 | *5/*5 | 28/97 | 0.7985 | 0.5184–1.2300 | 1.021 | 0.3073 | ( |
2 | *5B/*5B | 9/16 | 1.5850 | 0.6964–3.6073 | 1.098 | 0.2724 | ( |
3 | *5/*6 | 40/86 | 1.3260 | 0.8995–1.9548 | 1.425 | 0.1542 | ( |
4 | *5B/*6A | 14/33 | 1.1931 | 0.6337–2.2463 | 0.547 | 0.5844 | ( |
5 | *5/*7 | 21/22 | 2.7386 | 1.4941 – 5.0196 | 3.259 | 0.0011* | ( |
6 | *5B/*7B | 14/8 | 5.0014 | 2.0868–11.9868 | 3.609 | 0.0003** | ( |
7 | *6/*6 | 19/35 | 1.5388 | 0.8728 – 2.7128 | 1.490 | 0.1363 | ( |
8 | *6A/*6A | 60/32 | 5.7592 | 3.7066 – 8.9484 | 7.787 | <0.0001** | ( |
9 | *6A/*19 | 0/1 | 0.9326 | 0.0379 – 22.9265 | 0.043 | 0.9659 | ( |
10 | *6/*7 | 14/10 | 3.9960 | 1.7647–9.0486 | 3.322 | 0.0009** | ( |
11 | *6A/*7B | 58/32 | 5.5452 | 3.5601–8.6372 | 7.576 | <0.0001** | ( |
12 | *6J/*7B | 1/0 | 8.4133 | 0.3422 – 206.8371 | 1.304 | 0.1924 | ( |
13 | *7/*7 | 1/6 | 0.4659 | 0.0560–3.8785 | 0.706 | 0.4799 | ( |
14 | *7/*11 | 0/6 | 0.2145 | 0.0121–3.8144 | 1.048 | 0.2945 | ( |
15 | *7/*12 | 0/2 | 0.5592 | 0.0268–11.6658 | 0.375 | 0.7076 | ( |
16 | *7A/*7B | 0/4 | 0.3103 | 0.0167 – 5.7722 | 0.785 | 0.4327 | ( |
17 | *7B/*7B | 8/7 | 3.2329 | 1.1669 – 8.9567 | 2.257 | 0.0240* | ( |
18 | *7B/*13 | 1/0 | 8.4133 | 0.3422–206.8371 | 1.304 | 0.1924 | ( |
Overall | 288/397 | 3.1128 | 2.5470–3.8043 | 11.095 | <0.0001** |
The NAT2*6A/*6A group had an IDILI risk of 5.76 times that of other populations, and are spread over five countries, with a total frequency of 4%. Furthermore, the doubled cases from controls occurred in the populations of China, Thailand, Indonesia, and Japan. The distribution of cases and controls in Tunisia was balanced, and the NAT2*6A/*7B group was exposed to 5.54 times. They were spread over four countries, with a total frequency of 4%. In addition, the ratio of the total cases in China and Thailand was higher than the controls. On the contrary, the case reports in Indonesia and Japan were lower than the controls even though the numbers were almost equal. The NAT2*6/*7 group had an IDILI risk of 4 times that of the other population, and they were spread over five countries with a total frequency of 1%. More cases than controls were found in India, Indonesia, and Spain. Meanwhile, all populations in Tunisia and Brazil acted as the controls (Fig.
Frequency distribution of IDILI cases and controls of six NAT2 variants in various countries. Description of the country code abbreviation as follows; Brazil (BR), China (CN), Japan (JP), India (IN), Indonesia (ID), Thailand (TH), Tunisia (TN), Spain (ES). The country code with the suffix IDILI indicates the case population in that country while without affix indicates control population (
The results confirmed the IDILI risk level of the slow acetylator group to be 3.11 times higher than in other populations. These data complement previous publications, which suggested that the risk ranged from 3.18 to 4.7 times (
The six variants were the combinations of alleles *5, *5B, *6, *6A, *7, and *7B encoding a slow metabolic phenotype (
Previous reports suggested the IDILI risk for both Asian and non-Asian is evenly distributed across alleles and ethnic variants of the population (
The identity variants of the NAT2 genotype have consistently coded for the INH metabolic phenotype (
Several investigations consistently affirm the association between NAT2 slow acetylator status and an elevated susceptibility to (
Moreover, there is a call to develop predictive models that integrate both genetic and clinical risk factors to evaluate the risk of IDILI (
Recently, some reports have followed up on the NAT2 variant phenotype impact by offering a pharmacokinetic model, to establish a new era of INH dose personalization (
The results showed that the genotypes NAT2*5/*7, -*7B/*7B, -*6/*7, -*5B/*7B, -*6A/*7B, and -*6A/*6A, have a risk range of IDILI 2.74 to 5.76 times. Meanwhile, the case finding is dominant in the Asian population, due to the pharmacogenomic study development related to tuberculosis involving more populations from Asian countries. Furthermore, personalization of INH dosage is a solution to reduce the IDILI rate. However, the pharmacokinetic development model should consider the synergistic configuration factor of slow acetylator NAT2 with other enzymes related to the INH metabolic activity. These enzymes also encode the slow and null phenotype, such as CYP2E1*c1/c2 and GSTM1 respectively. The six variants are expected to become priorities for future studies, given the limited database on the IDILI susceptible types.
Three variants related to the NAT2*6 allele were classified as high risk; -*6A/*6A risk 5.76 times, -*6A/*7B (5.54 times), and -*6/*7 (4 times). The three allele configurations of the -*5 and -*7 were also classified as a significant risk; -*5B/*7B (5 times), -*7B/*7B (3.23 times), and -*5/*7 (2.74 times). Based on these findings, incorporating NAT2 genotyping into anti-tuberculosis drug prescriptions, in conjunction with CYP2E1 genotype analysis and predictive models, offers promising prospects for personalized dosing, risk assessment, and treatment monitoring. This approach has the potential to enhance treatment efficacy and reduce the risk of liver toxicity in tuberculosis patients. Therefore, further pharmacokinetic studies to establish INH dosage adjustments for these six variants are warranted.
The authors confirm contribution to the paper as follows: study conception and design: SBS, PP; data collection: SBS, PP; analysis and interpretation of results: SBS, PP, LMI; draft manuscript preparation: SBS, PP, LMI. All authors reviewed the results and approved the final version of the manuscript.
The results are the output of the Institutional Vision Revitalization Research of the Universitas Muhammadiyah Magelang (Unimma). The authors are grateful to the Unimma Research and Development Institute for facilitating the completion of research activities.