Review Article |
Corresponding author: Angel T. Alvarado ( eaa.alvarado@hotmail.com ) Academic editor: Plamen Peikov
© 2023 Angel T. Alvarado, Ana María Muñoz, Nelson Varela, Luis Sullón-Dextre, Mario Pineda, Mario Bolarte-Arteaga, María R. Bendezú, Jorge A. García, Haydee Chávez, Felipe Surco-Laos, Elizabeth J. Melgar-Merino, Pompeyo A. Cuba-Garcia, Aura Molina-Cabrera, Bertha Pari-Olarte, Mario Bonifaz-Hernandez, Juan F. Panay-Centeno, José Kong-Chirinos, José Almeida-Galindo.
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Alvarado AT, Muñoz AM, Varela N, Sullón-Dextre L, Pineda M, Bolarte-Arteaga M, Bendezú MR, García JA, Chávez H, Surco-Laos F, Melgar-Merino EJ, Cuba-Garcia PA, Molina-Cabrera A, Pari-Olarte B, Bonifaz-Hernandez M, Panay-Centeno JF, Kong-Chirinos J, Almeida-Galindo J (2023) Pharmacogenetic variants of CYP2C9 and CYP2C19 associated with adverse reactions induced by antiepileptic drugs used in Peru. Pharmacia 70(3): 603-618. https://doi.org/10.3897/pharmacia.70.e109011
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Epilepsy is the most common neurological disorder with a worldwide incidence of 20% and a treatment failure rate of 25–30%. The fluctuation in serum levels, efficacy and safety of antiepileptic drugs can be attributed to single nucleotide polymorphisms of genes encoding their respective proteins involved in drug metabolism. The present study attempted to evaluate the pharmacogenetic variants of CYP2C9 and CYP2C19 associated with adverse reactions induced by antiepileptic drugs used in Peru. Few studies were found to significantly associate the CYP2C9*2, CYP2C9*3, CYP2C19*2, and CYP2C19*3 single nucleotide polymorphisms with elevated serum levels of valproic acid and carbamazepine, and valproic acid induction of hyperammonemia, and adverse reactions cutaneous for carbamazepine. There is further evidence of a significant association of CYP2C9*2/CYP2C9*3 with severe cutaneous adverse reactions (SCARs) such as Stevens-Johnson syndrome (SJS) and epidermal necrolysis (TEN) phenytoin-induced. CYP2C9*3 may be a pharmacogenetic biomarker for such a drug. It is proposed to reduce the dose of drugs for intermediate and poor metabolizers. No pharmacogenetic studies were found in patients with epilepsy in Peruvian populations. It is concluded that this review could help physicians in the prediction and prevention of adverse reactions induced by antiepileptic drugs, as well as to improve their pharmacotherapeutic results. It could also be used as scientific evidence to carry out pharmacogenetic and precision medicine studies in Peruvian patients with epilepsy, due to their tricontinental and Latin American ancestry.
Antiepileptic drugs, CYP2C9, CYP2C19, pharmacogenetics, precision medicine, clinical implication
Epilepsy is a chronic neurological disorder characterized by self-limited seizures with a high probability of recurrence within the next 10 years, which may have a genetic, acquired or idiopathic origin (
Due to these considerations, the PubMed-Medline database on pharmacogenomic studies and precision medicine in Peru has been reviewed, with these investigations being scarce in patients with epilepsy, therefore, a review study is warranted in accordance with the new treatment approach that is postulated through precision medicine in epilepsy, which considers the pharmacogenetic profile, the serum level of the drug, ethnicity, miscegenation, and the patient’s sex, to individualize the dose of the drug, which will allow maintaining serum levels within the therapeutic index and minimize the adverse reactions induced by antiepileptic drugs (Alvarado et al. 2021;
A descriptive review of articles published in PubMed/Medline and Google Scholar was carried out. The search strategy was carried out using the keywords: “CYP2C9 gene”; “CYP2C19 gene”; “CYP2C9/C19 SNP”; “CYP2C9/C19 mutation” “pharmacokinetics of antiepileptic drugs”; “pharmacokinetics of valproic acid”; “pharmacokinetics of carbamazepine”; “Pharmacokinetics of Phenytoin”. Additionally, the Boolean operators AND, OR, and NOT were used to incorporate the use of CYP2C9/19 genes and resistance, CYP2C9/19 genes and adverse reactions, CYP2C9/C19 enzymes that metabolize antiepileptic drugs, CYP2C9/19 genes and clinical implication, which allowed a more refined review. No ethnic or language restriction was applied for the search and inclusion of published articles.
Valproic acid (VPA) is a short-chain branched-chain fatty acid derivative, chemically named 2-propylpentanoic acid (
It is observed that valproic acid is metabolized by phase II conjugation with the participation of UGT1B7 and others (UGT1A3, UGT1A4 and UGT1B15) forming valproyl 1-O-β-acyl glucuronide. By phase I, valproic acid is oxidized into three main metabolites: by CYP2C19 and CYP2C9 (and with CYP2A6 and CYP2B6) valproic acid is converted to 4-hydroxy valproic acid; by action of CYP2A6 it is biotransformed into 3-hydroxy valproic acid; by the action of CYP2C9, CYP2A6 and CYP2B6 it is converted to 5-hydroxy valproic acid. Figure made by the authors.
Carbamazepine (CBZ: 5-H-dibenzazepine-5-carboxamide) is an iminostilbene-type antiepileptic (
It is observed that carbamazepine is metabolized by three main routes: by action of CYP3A4 it is converted into 2,3-carbamazepine epoxide; by CYP3A4, CYP3A7 and CYP2B6 it is converted to 3-hydroxy-carbamazepine. By the action of CYP2C19, CYP2C9 and others (CYP3A4, CYP1A1 and CYP2D6) carbamazepine is biotransformed into carbamazepine 10,11-epoxide. The metabolite carbamazepine 10,11-epoxide is biotransformed by two routes: directly to carbamazepine 10,11-epoxide N-β-glucuronide by action of UGT2B7 and UGT1A6; By action of epoxide hydrolase, 10,11-dihydro-10,11-trans-dihydroxycarbamazepine (diOH-CBZ) is generated, then this metabolite is conjugated by UGT2B7 forming O-β-glucuronide of carbamazepine. Figure made by the authors.
Phenytoin (PHT) is a derivative of hydantoin (5,5-diphenylimidazolidine-2,4-dione) with a pKa of 8.3;2,59,60 being class 2 (low solubility and high permeability) according to the Biopharmaceutical Classification System (BCS) (
It is observed that phenytoin is metabolized by the action of CYP2C9 and CYP2C19 into phenytoin 3’,4’-epoxide, and by the action of epoxide reductase phenytoin is regenerated. The metabolite phenytoin 3´,4´-epoxide is metabolized by two routes: by action of epoxide hydrolase it becomes 3´,4´-dihydrodiol phenytoin; by the action of CYP2C9 and CYP2C19 it is converted to 5-(p-hydroxyphenyl)-5-phenylhydantoin (p-HPPH); then p-HPPH is converted to 3´,4´-dihydrodiol phenytoin by the action of CYP2C9 and CYP2C19; at the same time p-HPPH by action of UGT1A is converted into O-β-glucuronide of phenytoin. Figure made by the authors.
The CYP2C9 gene is located on the long arm of chromosome 10 in region 24 of 500 kb (10q24) consists of 9 exons and is highly polymorphic with more than 61 allelic variants and multiple sub-alleles (
The CYP2C9 enzyme (member of the mixed-function oxidase system, cytochrome P450: EC 1.14.13.48) is a 490-amino acid protein (
The CYP2C19 gene is located at locus 10q24.1 of chromosome 10 (long arm of chromosome 10 in region 24) where the coding sequence is 1473 bp, consists of 9 exons and 8 introns, encodes a protein of 490 residues of amino acids; presents more than 35 allelic variants and subvariants (
This gene encodes the CYP2C19 protein that metabolizes valproic acid, carbamazepine, and phenytoin; antidepressants (citalopram, escitalopram, sertraline, amitriptyline, clomipramine, doxepin, imipramine, and trimipramine), anticoagulants (clopidogrel), nonsteroidal anti-inflammatory drugs (NSAIDs), antihypertensives (propranolol), diazepam, proton pump inhibitors (PPIs), and others (
The frequency of metabolizers, poor metabolizers (PM) for CYP2C19 has been reported in Caucasian European populations to be 2–5% (
Pharmacokinetic parameters of valproic acid, carbamazepine, and phenytoin.
Drug | F (%) | tmax (h) | CmE (mg/L) | UP (%) | Vd (L/kg) | t1/2 (h) | Enzyme | Reference |
---|---|---|---|---|---|---|---|---|
Valproic acid | 95 | 1.5 | 50 | 90 | 0.1–0.4 | 4–20 | CYP2C9 | ( |
CYP2C19 | ||||||||
CYP2A6 | ||||||||
CYP2B6 | ||||||||
Carbamazepine | 70–85 | 4–8 | 4 | 75–85 | 1.4 | 8–20 | CYP2C9 | ( |
CYP2C19 | ||||||||
CYP3A4 | ||||||||
CYP2B6 | ||||||||
CYP3A7 | ||||||||
Phenytoin | 80 | 3–12 | 10 | 90 | 0.6–0.7 | 8–60 | CYP2C9 | (Lopez-Garcia et al. 2014; |
CYP2C19 |
Allele | Nucleotide change (cDNA) | Diplotype | Phenotype | Activity score | Reference |
---|---|---|---|---|---|
Gene/chromosome: CYP2C9/10q24 | |||||
CYP2C9*1 | None | CYP2C9*1/*1 | NM | 2 | ( |
CYP2C9*2 | 430C>T | CYP2C9*1/*2 | IM | 1.5 | ( |
(rs1799853) | CYP2C9*2/*2 | 1 | |||
CYP2C9*3 | 1075A>C | CYP2C9*1/*3 | IM | 1 | ( |
CYP2C9*2/*3 | PM | 0.5 | |||
(rs1057910) | CYP2C9*3/*3 | 0 | |||
CYP2C9*5 | delA818 | CYP2C9*5/*5 | ( |
||
Gene/chromosome: CYP2C19/10q24 | |||||
CYP2C19*1 | None | CYP2C19*1/*1 | NM | 1 | ( |
CYP2C19*2 | 681G>A | CYP2C19*1/*2 | IM | 0.5 | ( |
(rs4244285) | |||||
CYP2C19*2 | 681G>A | CYP2C19*2/*2 | PM | 0 | ( |
(rs4244285) | |||||
CYP2C19*3 | 636G>A | CYP2C19*3/*3 | |||
(rs4986893) | |||||
CYP2C19*4 | A>G | CYP2C19*4/*4 | |||
CYP2C19*5 | 1297C>T | CYP2C19*5/*5 | |||
CYP2C19*6 | 395G>A | CYP2C19*6/*6 | |||
CYP2C19*7 | T>A | CYP2C19*7/*7 | |||
CYP2C19*8 | 358T>C | CYP2C19*8/*8 | |||
CYP2C19*17 | -806C>T | CYP2C19*1/*17 | UM | 2 | ( |
(rs12248560) | CYP2C19*17/*17 |
Activity score and genotype: 2 an individual carrying two normal function alleles; 1.5 an individual carrying one allele of normal function plus one allele of decreased function; 1 one allele of normal function plus one allele without function or two alleles of decreased function; 0.5 an individual carrying a non-function allele plus a decreased-function allele; 0 two alleles without function.
Therapeutic drug monitoring is often used to adjust the dose to maintain serum concentrations within the therapeutic range, that is, the drug must exceed the minimum effective concentration (CmE) to avoid therapeutic failure or resistance to treatment; but it must not exceed the minimum toxic concentration (CMT), to avoid adverse reactions and toxicity of antiepileptic drugs; Therefore, therapeutic ranges of 10–20 mg/L phenytoin (PHT) have been proposed (
Meanwhile, Yampayon et al. investigated the association of the CYP2C9 and CYP2C19 genes with SCAR induced by PHT. The study included 36 Thai patients (15 with Stevens-Johnson syndrome (SJS) and 21 with drug rash with eosinophilia and systemic symptoms (DRESS)/drug hypersensitivity syndrome (DHS)) and 100 PHT-tolerant controls were studied. A CYP2C9*3 association of significant risk of SJS was found (adjusted OR 5.40, p = 0.0097) (
Type of study associated with adverse reactions and clinical implications.
Type of study | Genotype and phenotype | Clinical implication | Reference |
---|---|---|---|
Observational study | CYP2C19*2 IM CYP2C19*3 PM | The CYP2C19*2 and *3 SNPs are significantly associated with serum VPA levels, and the drug dose for IM and PM could be lower than for NM. | ( |
CYP2C9*3 PM | CYP2C9 variants may explain some of the substantial variability in VPA pharmacokinetics between different subjects | ( |
|
CYP2C9*3 PM | CYP2C9*3 is a predictive genetic marker to anticipate and decrease serious adverse skin reactions (SCARs) induced by PHT. | ( |
|
CYP2C9 IVS8-109T | Patients carrying CYP2C9 IVS8-109 T showed significantly supratherapeutic serum PHT concentrations. | ( |
|
CYP2C9*3 PM | Different genetic markers are associated with SCARs induced by PHT; It is suggested to perform genetic tests prior to treatment as predictors of SCAR induced by PHT. | ( |
|
Cases and controls study | CYP2C9*3 PM | There is a significant association of CYP2C9*3 with the eruption induced by PHT. The patient’s genotype should be verified prior to prescription to decrease the incidence of PHT-induced rash in clinical practice. | ( |
CYP2C9*3 PM | Clinical and genetic factors contributed to the risk of PHT-induced adverse reactions. | ( |
|
Cohort study | CYP2C9*2 IM | CYP2C9 allelic variants are associated with an increased risk of PHT-induced cutaneous adverse reactions. It is suggested to carry out pharmacogenetic tests on patients, and based on this, prescribe the correct dose and improve the safety of the drug. | ( |
Review study | CYP2C9*2 IM CYP2C9*3 PM | Precision medicine is the future of antiepileptic treatment that can improve the clinical outcomes of the disease. | ( |
CYP2C9*2 IM CYP2C9*3 PM | CYP2C9 pharmacogenetic testing is recommended as a new strategy for VPA therapy in childhood. This facilitates optimization of VPA dosing, helping to avoid adverse reactions induced by incorrect dosing, such as abnormal blood levels of ammonia and alkaline phosphatase, and improving the safety of anticonvulsant therapy in children. | ( |
|
CYP2C9*2/ CYP2C19*2 IM CYP2C9*3/ CYP2C19*3 PM | CYP2C9, CYP2C19, and others are potential biomarkers for VPA and CBZ therapy. More pharmacogenetic research and therapeutic drug monitoring studies are required to fully understand the impact on clinical practice. | ( |
|
CYP2C9*3 PM CYP2C19*2 IM | Dose adjustment based on CYP2C9 genotype, especially prior to therapy, would be beneficial to reduce the risk of CBZ and PHT adverse reactions or poisoning. | ( |
|
CYP2C9*3 PM | High arene oxide concentrations of PHT increase the probability of SJS and NET. | ( |
|
CYP2C9*3 PM | CYP2C9*3 is significantly associated with higher PHT concentrations and cutaneous adverse reactions. Prescribing pharmacogenetic testing is suggested to predict PHT-induced adverse reactions and guide optimal dose selection. | ( |
|
CYP2C9*2 IM CYP2C9*3 PM | The dose of PHT should be individualized based on the metabolic phenotype to reduce the risk of adverse reactions that could justify its withdrawal, even if it is effective. | ( |
|
CYP2C9*2 IM CYP2C9*3 PM | It is important to assess the risk of developing adverse reactions induced by VPA and propose its correction, according to the pharmacogenetic profile of the patient and the serum level of the drug. | ( |
|
Meta-analysis study | CYP2C9*3 PM | The CYP2C9*3 SNP is associated with increased serum levels of VPA. In patients with epilepsy and CYP2C9*3 genotype, dose adjustment may be necessary to maintain a serum VPA level within the therapeutic index. | ( |
Systematic review study and meta-analysis | CYP2C9*3 PM | There is a significant association between CYP2C9*3 and PHT-induced SJS/NE, especially in a Thai population. CYP2C9*3 is a predictive genetic biomarker of SJS/NE induced by PHT. | ( |
Meta-analysis study | CYP2C9*3 PM | Assessment of CYP2C9 and HLA risk alleles are predictive genetic tests to prevent PHT hypersensitivity in Asians. | ( |
Systematic review study and meta-analysis | CYP2C9*2/ CYP2C19*2 IM | Dosage for patients with IM CYP2C9 phenotype should be lower (2.1 to 3.4 mg/kg/day) to achieve therapeutic PHT levels. | ( |
Fig.
In parts A and B, it can be seen that the CYP2C9 gene is located in locus 10q24 of chromosome 10 (long arm of chromosome 10 in region 24) and encodes its respective CYP2C9 enzyme; the curve of serum concentration vs. time of a normal metabolizer (NM) whose concentration is within the therapeutic index is observed; allelic variants CYP2C9*2, CYP2C9*3, CYP2C19*2, and CYP2C19*3 are implicated in the poor metabolizer (PM) phenotype, in which case the serum valproic acid (VPA) concentration level exceeds the trough toxic concentration (CMT) of 100 mg/L and induces hyperammonemia (A); in part B it is observed that the serum level curve of phenytoin is greater than 20 mg/L; and the allelic variants CYP2C9*2 and CYP2C9*3, are associated with Stevens-Johnson syndrome (SJS) and toxic epidermal necrolysis (TEN). Part C shows that the CYP2C19 gene is located in the 10q24.1 locus of chromosome 10 and encodes its respective CYP2C19 enzyme; the curve of serum concentration vs time of a normal metabolizer (NM) and the curve of serum concentration vs time that exceeds the CMT of 12 mg/L in a PM, and the allelic variants CYP2C9*2, CYP2C9*3, CYP2C19*2 and CYP2C19*3 associated with cutaneous adverse reactions induced by carbamazepine (CBZ). Figure made by the authors.
The results of this review must be considered in the context of various limitations. The main one is in the scant literature published in Peru. Other biases that can lead to confusion is to include various observational, analytical, review, systematic, and meta-analysis studies, and not only consider studies with rigorous statistical analysis; however, this review should be considered as a contribution to science and to promote studies in pharmacogenetics and precision medicine in Peru.
Based on the review of the scientific literature, it is concluded that CYP2C9*2, CYP2C9*3, CYP2C19*2, and CYP2C19*3 single nucleotide polymorphisms may have a clinical impact on valproic acid, carbamazepine, and phenytoin therapy. There is more evidence of a significant association between CYP2C9*3 and the adverse reactions induced by phenytoin; CYP2C9*3 being proposed as a predictive genetic biomarker of Stevens-Johnson syndrome and epidermal necrolysis induced by the aforementioned drug.
In the short term, more multicenter studies and large prospective observational studies of pharmacogenetics in patients with epilepsy are required before starting treatment, to evaluate the association between genes, high serum levels and adverse drug reactions.
The review studies will form part of the scientific evidence, so that it can be done in the future analytical observational studies (cases/controls and cohorts) and randomized clinical trials (RCTs) of pharmacogenetics will be carried out, which will allow the implementation of precision medicine in the delivery systems health of Peru and will be a routine clinical practice that contributes to improving the quality of life of patients.
We hope that this review study will be considered as a valuable tool to individualize the dose of drugs, at the same time, give sustainability to medical care and Pharmacotherapeutic Follow-up in the Clinical Pharmacy of Peru.