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Article title
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Abstract
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Keywords
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Introduction
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Materials and methods
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Retrieval of CTNNB1 CDS and multiple sequence alignment
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Prediction of siRNAs
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GC content, presence of palindromic sequences, and off-target similarity search
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Prediction of target site accessibility
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Secondary structure prediction of siRNA and mRNA-siRNA duplexes and thermodynamics analysis
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Structure retrieval and optimization of human Argonaute 2
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siRNA tertiary structure modeling
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Molecular docking of siRNAs to human Argonaute 2
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Molecular dynamics of the siRNA-Ago2 complex
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Binding energy calculation
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Results
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Retrieval of CTNNB1 CDS and multiple sequence alignment
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siRNA prediction
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GC content, presence of palindromic sequences, and off-target similarity search
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Prediction of target site accessibility
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Secondary structure prediction of siRNA and mRNA-siRNA duplexes and thermodynamics analysis
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Structure retrieval and optimization of human Argonaute 2
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Molecular docking of siRNAs to human Argonaute 2
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Molecular dynamics simulation
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Binding energy calculations
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Discussion
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Conclusion
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Acknowledgements
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References
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Supplementary materials
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